Table of Contents

June 2011; 17 (6)

BIOINFORMATICS

  • Identification of potential conserved RNA secondary structure throughout influenza A coding regions

    • Walter N. Moss,
    • Salvatore F. Priore,
    • and Douglas H. Turner
    RNA June 2011 17: 991-1011; Published in Advance May 2, 2011, doi:10.1261/rna.2619511

  • Plant siRNAs from introns mediate DNA methylation of host genes

    • Dijun Chen,
    • Yijun Meng,
    • Chunhui Yuan,
    • Lin Bai,
    • Donglin Huang,
    • Shaolei Lv,
    • Ping Wu,
    • Ling-ling Chen,
    • and Ming Chen
    RNA June 2011 17: 1012-1024; Published in Advance April 25, 2011, doi:10.1261/rna.2589011

REPORTS

  • mRNA isoform diversity can obscure detection of miRNA-mediated control of translation

    • Jennifer L. Clancy,
    • Grace H. Wei,
    • Nicole Echner,
    • David T. Humphreys,
    • Traude H. Beilharz,
    • and Thomas Preiss
    RNA June 2011 17: 1025-1031; Published in Advance April 5, 2011, doi:10.1261/rna.2567611

  • Potent and systematic RNAi mediated silencing with single oligonucleotide compounds

    • Jennifer Lapierre,
    • William Salomon,
    • James Cardia,
    • Karen Bulock,
    • Jessica T. Lam,
    • William J. Stanney,
    • Glenna Ford,
    • Bernice Smith-Anzures,
    • Tod Woolf,
    • Joanne Kamens,
    • Anastasia Khvorova,
    • and Dmitry Samarsky
    RNA June 2011 17: 1032-1037; Published in Advance April 14, 2011, doi:10.1261/rna.2399411

  • Functional consequences of T-stem mutations in E. coli tRNAThrUGU in vitro and in vivo

    • Margaret E. Saks,
    • Lee E. Sanderson,
    • Daniel S. Choi,
    • Catherine M. Crosby,
    • and Olke C. Uhlenbeck
    RNA June 2011 17: 1038-1047; Published in Advance April 28, 2011, doi:10.1261/rna.2427311

  • Identification of mRNAs that are spliced but not exported to the cytoplasm in the absence of THOC5 in mouse embryo fibroblasts

    • Anuja Guria,
    • Doan Duy Hai Tran,
    • Sheetal Ramachandran,
    • Alexandra Koch,
    • Omar El Bounkari,
    • Priyanka Dutta,
    • Hansjörg Hauser,
    • and Teruko Tamura
    RNA June 2011 17: 1048-1056; Published in Advance April 27, 2011, doi:10.1261/rna.2607011

ARTICLES

  • SID-1 is a dsRNA-selective dsRNA-gated channel

    • Joseph D. Shih and
    • Craig P. Hunter
    RNA June 2011 17: 1057-1065; Published in Advance April 7, 2011, doi:10.1261/rna.2596511

  • Fully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluation

    • Julie Bernauer,
    • Xuhui Huang,
    • Adelene Y.L. Sim,
    • and Michael Levitt
    RNA June 2011 17: 1066-1075; Published in Advance April 26, 2011, doi:10.1261/rna.2543711
    OPEN ACCESS ARTICLE

  • Precursor miR-886, a novel noncoding RNA repressed in cancer, associates with PKR and modulates its activity

    • Kwanbok Lee,
    • Nawapol Kunkeaw,
    • Sung Ho Jeon,
    • Inhan Lee,
    • Betty H. Johnson,
    • Gum-Yong Kang,
    • Joo Young Bang,
    • Hyung Soon Park,
    • Chanvit Leelayuwat,
    • and Yong Sun Lee
    RNA June 2011 17: 1076-1089; Published in Advance April 25, 2011, doi:10.1261/rna.2701111

  • Identification of piRNAs in the central nervous system

    • Eun Joo Lee,
    • Sourav Banerjee,
    • Hongjun Zhou,
    • Aruna Jammalamadaka,
    • Mary Arcila,
    • B.S. Manjunath,
    • and Kenneth S. Kosik
    RNA June 2011 17: 1090-1099; Published in Advance April 22, 2011, doi:10.1261/rna.2565011

  • A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop

    • Sonia D'Silva,
    • Steffen J. Haider,
    • and Eric M. Phizicky
    RNA June 2011 17: 1100-1110; Published in Advance April 25, 2011, doi:10.1261/rna.2652611

  • Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae

    • Akiko Noma,
    • Sanghyun Yi,
    • Takayuki Katoh,
    • Yoshimi Takai,
    • Takeo Suzuki,
    • and Tsutomu Suzuki
    RNA June 2011 17: 1111-1119; Published in Advance April 25, 2011, doi:10.1261/rna.2653411

  • Activation of picornaviral IRESs by PTB shows differential dependence on each PTB RNA-binding domain

    • Panagiota Kafasla,
    • Helen Lin,
    • Stephen Curry,
    • and Richard J. Jackson
    RNA June 2011 17: 1120-1131; Published in Advance April 25, 2011, doi:10.1261/rna.2549411

  • Interaction between FLASH and Lsm11 is essential for histone pre-mRNA processing in vivo in Drosophila

    • Brandon D. Burch,
    • Ashley C. Godfrey,
    • Pamela Y. Gasdaska,
    • Harmony R. Salzler,
    • Robert J. Duronio,
    • William F. Marzluff,
    • and Zbigniew Dominski
    RNA June 2011 17: 1132-1147; Published in Advance April 27, 2011, doi:10.1261/rna.2566811

  • The specific binding to 21-nt double-stranded RNAs is crucial for the anti-silencing activity of Cucumber vein yellowing virus P1b and perturbs endogenous small RNA populations

    • Adrián Valli,
    • Juan Carlos Oliveros,
    • Attila Molnar,
    • David Baulcombe,
    • and Juan Antonio García
    RNA June 2011 17: 1148-1158; Published in Advance April 29, 2011, doi:10.1261/rna.2510611

  • Solution structure of RNase P RNA

    • Alexei V. Kazantsev,
    • Robert P. Rambo,
    • Sina Karimpour,
    • John SantaLucia, Jr.,
    • John A. Tainer,
    • and Norman R. Pace
    RNA June 2011 17: 1159-1171; Published in Advance April 29, 2011, doi:10.1261/rna.2563511

  • Role of polynucleotide phosphorylase in sRNA function in Escherichia coli

    • Nicholas De Lay and
    • Susan Gottesman
    RNA June 2011 17: 1172-1189; Published in Advance April 28, 2011, doi:10.1261/rna.2531211
|

This Issue

June 2011; 17 (6)
Cover
  1. BIOINFORMATICS
  2. REPORTS
  3. ARTICLES

Find articles in this issue containing these words:

Current Issue

  1. July 2026, 32 (7)
  1. Current Issue
  1. Alert me to new issues of RNA