Neuronal subtype–specific ribosomal protein mRNA expression

TABLE 1.

Summary of differentially expressed ribosomal protein (RP) genes from the Smart-seq2 data set

Summary of differentially expressed ribosomal proteins (DE RPs) by brain region
Class-level analysis Subclass-level analysis
Total classes Unique DE RPs Total findings Total subclasses Unique DE RPs Total findings
ACA 2 2 2 12 49 260
AI 1 a a 2 0 0
ALM 2 0 0 13 68 541
HIP 2 4 4 8 46 160
MOp 2 0 0 12 38 223
RSP 1 a a 2 0 0
RSPv 1 a a 2 0 0
SSp 2 2 2 10 44 149
SSs 1 a a 2 57 57
VISp 2 0 0 10 62 399
VIS 2 2 2 15 26 104
Total 2 7 10 20 83 1893
  • The table summarizes the results of the pseudobulk differential expression analysis performed for each brain region at both the class and subclass levels. For each level, the table reports the number of unique RP genes found to be differentially expressed in at least one pairwise comparison (unique DE RPs), and the total number of significant differential expression events across all comparisons (total DE events). Differentially expressed RPs were defined by Padj < 0.05 and an absolute fold change >1.5.

  • aComparison not applicable (n = 1 class).

This Article

  1. RNA 32: 1077-1100