Live-cell imaging of circular and long noncoding RNAs associated with FUS pathological aggregates by Pepper fluorescent RNA

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

FIGURE 5.
FIGURE 5.

nHOTAIRM1 recruitment in SG followed with Pepper fRNA. (A) Representative HEK 293T cell expressing both nHOTAIRM1 labeled with HBC620 (magenta) and GFP–G3BP1 (green). Time 00:00:00 corresponds to 0.5 mM NaAsO2 administration (upper row), whereas in the following time points (second and third row) formation of SG can be followed (duration 1 h; interval 1–3 min). All scale bars correspond to 5 μm. (B) Magnification view of yellow box in A showing different nHOTAIRM1 particles and G3BP1 undergoing LLPS throughout the oxidative stress event (yellow and light blue asterisks) and merging (time points 00:39:00 and 00:44:12). Second and fourth row show binary masks of the selected time points highlighting fusion events. Scale bars, 5 μm. (C) Average Manders’ coefficient between nHOTAIRM1 and G3BP1 over time upon NaAsO2 administration. Dots represent average values of Manders’ coefficient. Error bars represent ± SEM. Average and SEM values were calculated from 5 to 10 time-lapse measurements (duration 1 h; interval 1–5 min) collected from three independent biological replicates. Each color (magenta, gray, and green) corresponds to a single biological replicate. (***) P ≤ 0.001 corresponds to two-tailed paired Student's t-test (N = 3). (D) Scatter plot showing intersection area over time calculated from intersection mask between G3BP1 and nHOTAIRM1 signals of A. A polynomial curve was fitted to the points in order to show the increase over time (R2 = 0.8838).

This Article

  1. RNA 31: 529-548