TABLE 1.
tRNA genes corresponding to NYN in the four-codon box family among species of the genus Lactobacillus for which the sequence of complete tRNA genes has been reported
| Species | tRNA anticodon | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Val | Pro | Ala | Thr | |||||||
| UAC | UGC | CGG | GGC | UGC | CGC | AGU | GGU | UGU | CGU | |
| Lactobacillus salivarius UCC118 | + | + | + | − | + | − | − | + | + | + |
| Lactobacillus salivarius JCM1046 | + | + | + | − | + | − | − | + | + | + |
| Lactobacillus sanfranciscensis TMW 1.1304 | + | + | − | − | + | − | + | + | + | + |
| Lactobacillus salivarius CECT 5713 | + | + | + | − | + | − | − | + | + | + |
| Lactobacillus sakei subsp. sakei 23K | + | + | + | − | + | + | − | + | + | + |
| Lactobacillus rhamnosus LOCK900 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus rhamnosus LOCK908 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus rhamnosus Lc 705 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus rhamnosus GG GG ATCC 53103 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus rhamnosus GG ATCC 53103 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus rhamnosus ATCC 8530 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus ruminis ATCC 27782 | + | + | + | − | + | − | − | + | + | + |
| Lactobacillus reuteri TD1 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus reuteri SD2112 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus reuteri JCM 1112 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus reuteri DSM 20016 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus reuteri I5007 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus plantarum subsp. plantarum ST-III | + | + | + | − | + | + | + | + | + | + |
| Lactobacillus plantarum 16 | + | + | + | − | + | + | + | + | + | + |
| Lactobacillus plantarum B21 | + | + | + | − | − | + | + | + | + | + |
| Lactobacillus plantarum JDM1 | + | + | + | − | − | + | + | + | + | + |
| Lactobacillus plantarum WCFS1 | + | + | + | − | + | + | + | + | + | + |
| Lactobacillus plantarum ZJ316 | + | + | + | − | − | + | + | + | + | + |
| Lactobacillus plantarum subsp. plantarum P-8 | + | + | + | − | + | + | + | + | + | + |
| Lactobacillus paracasei subsp. paracasei JCM 8130 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus paracasei subsp. paracasei 8700_2 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus paracasei N1115 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus kefiranofaciens ZW3 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus mucosae LM1 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus johnsonii DPC 6026 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus johnsonii N6.2 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus johnsonii NCC 533 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus johnsonii FI9785 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus helveticus H9 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus helveticus KLDS1.8701 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus helveticus R0052 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus helveticus H10 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus helveticus DPC 4571 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus helveticus CNRZ32 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus hokkaidonensis LOOC260 | + | + | + | − | + | − | + | − | + | + |
| Lactobacillus gasseri ATCC 33323 JCM 1131 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 JCM 1002 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus delbrueckii subsp. bulgaricus 2038 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus delbrueckii subsp. bulgaricus ND02 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus fermentum IFO 3956 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus fermentum F-6 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus fermentum CECT 5716 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus crispatus ST1 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus casei subsp. casei ATCC 393 | + | + | + | + | + | + | + | + | + | + |
| Lactobacillus casei str. Zhang | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei W56 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei LOCK919 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei LC2W | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei BL23 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei BD-II | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei ATCC 334 | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus casei 12A | + | + | + | + | + | + | − | + | + | + |
| Lactobacillus buchneri NRRL B-30929 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus buchneri CD034 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus brevis BSO 464 | + | + | + | − | − | + | + | + | + | + |
| Lactobacillus brevis KB290 | + | + | + | − | + | + | + | + | + | + |
| Lactobacillus brevis ATCC 367 | + | + | + | − | + | + | + | + | + | + |
| Lactobacillus amylovorus GRL1118 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus amylovorus GRL 1112 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus acidophilus NCFM | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus acidophilus La-14 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus acidophilus FSI4 | + | + | + | − | + | − | + | + | + | + |
| Lactobacillus acidophilus 30SC | + | + | + | − | + | − | + | + | + | + |
-
Species names and taxonomy follow pre-2020.
