Improved functions for nonlinear sequence comparison using SEEKR

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FIGURE 5.
FIGURE 5.

Not all expressed, XIST-like lncRNA annotations are supported by RNA-seq data in K562 cells. (A–F) Screen images from the UCSC Genome Browser displaying gene annotations, location and identity of XIST-like fragments, and read density from ribosome-depletion total RNA-seq (total), chromatin-associated RNA-seq (chromatin), and Bru-seq experiments (bruseq) performed in K562 cells (Dunham et al. 2012; Luo et al. 2020).

This Article

  1. Published in Advance August 26, 2024, doi: 10.1261/rna.080188.124 RNA 30: 1408-1421

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