Improved functions for nonlinear sequence comparison using SEEKR

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FIGURE 3.
FIGURE 3.

Domain-based search identifies chromatin-associated lncRNAs that harbor XIST-like fragments. (A–D) Screen images from the UCSC Genome Browser displaying gene annotations, location and identity of XIST-like fragments, read density from chromatin-associated RNA-seq and from Bru-seq, and background-corrected eCLIP signal for a subset of RBPs enriched over the tandem repeats of XIST.

This Article

  1. Published in Advance August 26, 2024, doi: 10.1261/rna.080188.124 RNA 30: 1408-1421

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