Tho2 is critical for the recruitment of Rrp6 to chromatin in response to perturbed mRNP biogenesis

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FIGURE 4.
FIGURE 4.

The Tho2 CTD recruits Rrp6 to aberrant local transcripts. Assays were performed with wild-type, tho2Δ1408–1597, and tho2Δ1271–1597 cells, expressing (+Rho) or not expressing (−Rho) Rho. (A) Schematic of the Tho2 constructs. tho2Δ1408–1597: a Tho2 variant with truncated Tho2 CTD (lacking residues 1408–1597), tho2Δ1271–1597: a Tho2 variant lacking the entire Tho2 CTD (lacking residues 1271–1597). (B) Beeswarm plot summarizing the log2 fold-enrichment of Rrp6 ChIP-seq peaks. P-values: 0.05 > * > 0.01 > ** > 0.001 > ***, (NA) not applicable, (NS) not significant, (Nf) number of analyzed protein-coding genes, (Np) number of detected peaks. (C) Circos plots showing the genome-wide distribution of Rrp6 ChIP-seq peaks across the protein-coding loci.

This Article

  1. RNA 30: 89-98