Table of Contents

LETTER TO THE EDITOR

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Post-transcriptional control of DGCR8 expression by the Microprocessor
- Robinson Triboulet,
- Hao-Ming Chang,
- Robert J. LaPierre,
- and Richard I. Gregory
RNA June 2009 15: 1005-1011; Published in Advance April 21, 2009, doi:10.1261/rna.1591709

BIOINFORMATICS

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Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA
- Philip Tedder,
- Elena Zubko,
- David R. Westhead,
- and Peter Meyer
RNA June 2009 15: 1012-1020; Published in Advance April 15, 2009, doi:10.1261/rna.1517209
OPEN ACCESS ARTICLE

REPORTS

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Equal transcription rates of productively and nonproductively rearranged immunoglobulin μ heavy chain alleles in a pro-B cell line
- Andrea B. Eberle,
- Kai Herrmann,
- Hans-Martin Jäck,
- and Oliver Mühlemann
RNA June 2009 15: 1021-1028; Published in Advance April 10, 2009, doi:10.1261/rna.1516409
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Co-occupancy of two Pumilio molecules on a single hunchback NRE
- Yogesh K. Gupta,
- Tammy H. Lee,
- Thomas A. Edwards,
- Carlos R. Escalante,
- Lyudmila Y. Kadyrova,
- Robin P. Wharton,
- and Aneel K. Aggarwal
RNA June 2009 15: 1029-1035; Published in Advance April 16, 2009, doi:10.1261/rna.1327609
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Structure–activity relationships in Kluyveromyces lactis γ-toxin, a eukaryal tRNA anticodon nuclease
- Niroshika Keppetipola,
- Ruchi Jain,
- Birthe Meineke,
- Melinda Diver,
- and Stewart Shuman
RNA June 2009 15: 1036-1044; Published in Advance April 21, 2009, doi:10.1261/rna.1637809
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Regulation of NAB2 mRNA 3′-end formation requires the core exosome and the Trf4p component of the TRAMP complex
- Kelly M. Roth,
- Joel Byam,
- Feng Fang,
- and J. Scott Butler
RNA June 2009 15: 1045-1058; Published in Advance April 15, 2009, doi:10.1261/rna.709609
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The C-terminal domains of human TNRC6A, TNRC6B, and TNRC6C silence bound transcripts independently of Argonaute proteins
- Daniela Lazzaretti,
- Isabelle Tournier,
- and Elisa Izaurralde
RNA June 2009 15: 1059-1066; Published in Advance April 21, 2009, doi:10.1261/rna.1606309
OPEN ACCESS ARTICLE

ARTICLES

METHOD

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DOCK 6: Combining techniques to model RNA–small molecule complexes
- P. Therese Lang,
- Scott R. Brozell,
- Sudipto Mukherjee,
- Eric F. Pettersen,
- Elaine C. Meng,
- Veena Thomas,
- Robert C. Rizzo,
- David A. Case,
- Thomas L. James,
- and Irwin D. Kuntz
RNA June 2009 15: 1219-1230; Published in Advance April 15, 2009, doi:10.1261/rna.1563609

LETTER TO THE EDITOR

Post-transcriptional control of DGCR8 expression by the Microprocessor

BIOINFORMATICS

Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA

REPORTS

Equal transcription rates of productively and nonproductively rearranged immunoglobulin μ heavy chain alleles in a pro-B cell line

Co-occupancy of two Pumilio molecules on a single hunchback NRE

Structure–activity relationships in Kluyveromyces lactis γ-toxin, a eukaryal tRNA anticodon nuclease

Regulation of NAB2 mRNA 3′-end formation requires the core exosome and the Trf4p component of the TRAMP complex

The C-terminal domains of human TNRC6A, TNRC6B, and TNRC6C silence bound transcripts independently of Argonaute proteins

ARTICLES

A C-terminal silencing domain in GW182 is essential for miRNA function

Mammalian GW182 contains multiple Argonaute-binding sites and functions in microRNA-mediated translational repression

A single C. elegans PUF protein binds RNA in multiple modes

Accuracy modulating mutations of the ribosomal protein S4-S5 interface do not necessarily destabilize the rps4-rps5 protein–protein interaction

Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae

Vg1RBP phosphorylation by Erk2 MAP kinase correlates with the cortical release of Vg1 mRNA during meiotic maturation of Xenopus oocytes

The yfiC gene of E. coli encodes an adenine-N6 methyltransferase that specifically modifies A37 of tRNA₁^Val(cmo⁵UAC)

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

Gene regulation by sense–antisense overlap of polyadenylation signals

Cold-inducible RNA binding protein (CIRP) expression is modulated by alternative mRNAs

The fraction of RNA that folds into the correct branched secondary structure determines hepatitis delta virus type 3 RNA editing levels

SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs

The conserved 3′ end domain of U6atac snRNA can direct U6 snRNA to the minor spliceosome

An extra double-stranded RNA binding domain confers high activity to a squid RNA editing enzyme

METHOD

DOCK 6: Combining techniques to model RNA–small molecule complexes

This Issue

Current Issue

In This Issue

Table of Contents

LETTER TO THE EDITOR

Post-transcriptional control of DGCR8 expression by the Microprocessor

BIOINFORMATICS

Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA

REPORTS

Equal transcription rates of productively and nonproductively rearranged immunoglobulin μ heavy chain alleles in a pro-B cell line

Co-occupancy of two Pumilio molecules on a single hunchback NRE

Structure–activity relationships in Kluyveromyces lactis γ-toxin, a eukaryal tRNA anticodon nuclease

Regulation of NAB2 mRNA 3′-end formation requires the core exosome and the Trf4p component of the TRAMP complex

The C-terminal domains of human TNRC6A, TNRC6B, and TNRC6C silence bound transcripts independently of Argonaute proteins

ARTICLES

A C-terminal silencing domain in GW182 is essential for miRNA function

Mammalian GW182 contains multiple Argonaute-binding sites and functions in microRNA-mediated translational repression

A single C. elegans PUF protein binds RNA in multiple modes

Accuracy modulating mutations of the ribosomal protein S4-S5 interface do not necessarily destabilize the rps4-rps5 protein–protein interaction

Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae

Vg1RBP phosphorylation by Erk2 MAP kinase correlates with the cortical release of Vg1 mRNA during meiotic maturation of Xenopus oocytes

The yfiC gene of E. coli encodes an adenine-N6 methyltransferase that specifically modifies A37 of tRNA1Val(cmo5UAC)

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

Gene regulation by sense–antisense overlap of polyadenylation signals

Cold-inducible RNA binding protein (CIRP) expression is modulated by alternative mRNAs

The fraction of RNA that folds into the correct branched secondary structure determines hepatitis delta virus type 3 RNA editing levels

SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs

The conserved 3′ end domain of U6atac snRNA can direct U6 snRNA to the minor spliceosome

An extra double-stranded RNA binding domain confers high activity to a squid RNA editing enzyme

METHOD

DOCK 6: Combining techniques to model RNA–small molecule complexes

This Issue

Current Issue

In This Issue

The yfiC gene of E. coli encodes an adenine-N6 methyltransferase that specifically modifies A37 of tRNA₁^Val(cmo⁵UAC)