RCSB MAXIT report on stereochemistry of submitted models,,,,,,,,
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PZ9,,,,,,,,
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No.,3D RNA model,(a)Close contact,(b)RMSD bond,(c)RMSD angle,(d)Planes,(e)Chiral,(f)Polymer Linkage,Total
1,9_Das_6,0,0,0,1,0,0,1
2,9_Das_7,0,0,0,1,0,0,1
3,9_0_solution_5kpy,0,0,2,0,0,0,2
4,9_Das_8,0,0,1,1,0,0,2
5,9_Das_9,0,0,1,1,0,0,2
6,9_Das_1,0,1,3,1,0,0,5
7,9_Das_3,0,1,3,1,0,0,5
8,9_Das_4,0,1,3,1,0,0,5
9,9_Das_2,0,1,4,1,0,0,6
10,9_Das_5,0,1,4,1,0,0,6
11,9_Chen_4,17,0,2,0,0,2,21
12,9_Chen_3,16,1,5,0,0,2,24
13,9_Chen_2,20,1,4,0,0,1,26
14,9_Chen_1,7,3,21,0,0,2,33
15,9_Chen_5,22,2,8,0,0,1,33
16,9_Chen_7,24,3,17,0,0,1,45
17,9_Ding_5,0,0,42,24,0,0,66
18,9_Ding_7,0,0,57,14,0,0,71
19,9_Ding_6,0,0,52,21,0,0,73
20,9_Chen_8,37,5,26,0,0,12,80
21,9_Ding_8,0,1,62,20,0,0,83
22,9_Ding_4,0,0,59,26,0,0,85
23,9_Ding_9,0,1,64,20,0,0,85
24,9_Ding_10,0,0,60,27,0,0,87
25,9_Ding_3,0,0,59,29,0,0,88
26,9_Chen_6,46,6,28,0,0,13,93
27,9_Ding_1,0,1,69,25,0,0,95
28,9_Ding_2,0,0,78,24,0,0,102
29,9_Dokholyan_3,0,2,68,49,0,0,119
30,9_Dokholyan_1,0,1,76,48,0,0,125
31,9_Bujnicki_3,0,14,86,15,12,0,127
32,9_Bujnicki_4,0,14,86,15,12,0,127
33,9_Bujnicki_5,0,14,86,15,12,0,127
34,9_Dokholyan_4,0,4,76,54,0,0,134
35,9_Dokholyan_2,0,4,81,53,0,0,138
(a) number of identified too-close contacts between symmetry-related molecules in the case of crystallographic experiments.
(b) and (c) RMSD bond and angle lengths.
(d) number of unexpected deviations from planes centers.
(e) number of identified chirality errors.
(f) number of identified polymer linkage artifacts.
Gore, S., García, E. S., Hendrickx, P. M., Gutmanas, A., Westbrook, J. D., Yang, H., ... & Ikegawa, Y. (2017). Validation of structures in the Protein Data Bank. Structure, 25(12), 1916-1927. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5718880/