Structure and function analysis of the poliovirus cis-acting replication element (CRE)

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FIGURE 7.
FIGURE 7.

The poliovirus CRE functions when located in the 5′ NCR of the genome. Complementary oligonucleotides for the CRE were directionally cloned between the Bam HI and Sac I sites located, respectively, in the 5′ NCR and region encoding the amino-terminus of VP4. The CRE sequence was modified by substitution of U15A/A49U (Fig. 1A) to replace the AUG49–51 to generate pT7/SL3HVCRE-AUG. The same region of pT7/SL3 was also replaced with oligonucleotides encoding the Synth2 CRE, and a Synth2-derived CRE in which one of the conserved A triplet was deleted (generating pT7/SL3-HVSynth2 and pT7/SL3-HVSynth2ΔA, respectively). Normalized levels of RNA generated in vitro, and serial 10-fold dilutions, was transfected into HeLa cells and overlaid with agar. Plaques were visualized after 3 d by staining with crystal violet.

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