Comprehensive mapping of the 5′ and 3′ untranslated regions of Aspergillus fumigatus reveals diverse mechanisms of mRNA processing including premature transcription termination

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FIGURE 3.
FIGURE 3.

A. fumigatus exhibits 5′ UTRs of typical length, but relatively longer 3′ UTRs than other fungi. (A) Histograms (bin size equals 5) of UTR length distribution based on the observed high-confidence 5′ and 3′ poly(A)-enriched RNA ends. (B) Comparison of average UTR lengths with other eukaryotes (Graber et al. 1999; Misra et al. 2002; Chen et al. 2011; Srivastava et al. 2018; Wallace et al. 2020; Hong and Jeong 2023). (C) Transcriptomic snapshot of AFUB_035670 together with the measured 5′ and 3′ end sites; the 5′ UTR of AFUB_035670 was determined to be 2150 nt long compared to the prior prediction of 703 nt in Af293. Arrowheads indicate the positions of detected high-confidence 5′/3′ end sites. Read tracks were smoothened to improve viewability, and this infrequently masks some small introns.

This Article

  1. RNA 32: 250-266