Integrated NMR and MD structure and dynamics of the stem–loop-II motif (s2m) from the Omicron variant of SARS-CoV-2

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FIGURE 8.
FIGURE 8.

(A) Distribution of the χ dihedral angle sampled over MD trajectories for each pentaloop nucleotide. (B) Cross-correlated relaxation (CCR) rate calculated from MD, where mean values are given by dots (C8 = −4.4 Hz; U9 = 10.1 Hz; A10 = 6.3 Hz).

This Article

  1. Published in Advance September 19, 2025, doi: 10.1261/rna.080576.125 RNA 31: 1766-1787

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