Understanding off-target growth defects introduced to influenza A virus by synonymous recoding

TABLE 2.

Site-directed mutagenesis primers targeting nucleotide positions 312 and 315 in PR8 segment 5

Target strain Segment 5 mutation Sequence
PR8 WT T312A_Fw GTCCTCCAGTTTTCTTTGGATCTTTCCCCGCAC
T312A_Rev GTGCGGGGAAAGATCCAAAGAAAACTGGAGGAC
G315A_Fw ATAGGTCCTCCAGTTTTTTTAGGATCTTTCCCCGC
G315A_Rev GCGGGGAAAGATCCTAAAAAAACTGGAGGACCTAT
T312A G315A_Fw TATAGGTCCTCCAGTTTTTTTTGGATCTTTCCCCGCACTG
T312A G315A_Rev CAGTGCGGGGAAAGATCCAAAAAAAACTGGAGGACCTATA
PR8 segment 5 CpGH A312T_Fw GGTCCTCCAGTTTTTTTAGGATCTTTACCCGCGCT
A312T_Rev AGCGCGGGTAAAGATCCTAAAAAAACTGGAGGACC
A315G_Fw ATGGGTCCTCCAGTTTTCTTTGGATCTTTACCCGC
A315G_Rev GCGGGTAAAGATCCAAAGAAAACTGGAGGACCCAT
A312T A315G_Fw AATGGGTCCTCCAGTTTTCTTAGGATCTTTACCCGCGCTC
A312T A315G_Rev GAGCGCGGGTAAAGATCCTAAGAAAACTGGAGGACCCATT

This Article

  1. RNA 31: 1557-1574