RNA fold prediction by Monte Carlo in graph space and the statistical mechanics of tertiary interactions

TABLE 4.

Targets in the Rzs test set with kissing loop interactions in their native structures

Rzs kissing loop test set
1Y26 (71) 3D0U (161) 3DIL (174) 3IVN (70) 3LA5 (71)
3RKF (67) 3SKI (68) 4FEN (67) 4FRG (84) 4MGN (164)
4XNR (71) 5C45 (113) 5FJC (95) 5NDI (43) 5SWD (71)
6DN2 (112) 6E1S (33) 6VMY (148)
Mean quality scores of fold predictions
Model TPR mFPR
Vienna 0.650 0.269
ASMC 0.707 0.223

This Article

  1. RNA 31: 14-31