RNA fold prediction by Monte Carlo in graph space and the statistical mechanics of tertiary interactions

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FIGURE 11.
FIGURE 11.

Panels A–E show evolution of the spectrum of the simulated ensemble for 2MIY as a function of μ in units of kBT. The most probable graph in each is shown in pink, and its frame graph on the right. (F) Entropy of the ensemble in units of kB as a function of the chemical potential. The nonmonotonic behavior indicated by the white circles suggests possible sampling ergodicity issues. The dashed line is a guide to the eye.

This Article

  1. Published in Advance October 23, 2024, doi: 10.1261/rna.080216.124 RNA 31: 14-31

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