Characterization of Cwc2, U6 snRNA, and Prp8 interactions destabilized by Prp16 ATPase at the transition between the first and second steps of splicing

TABLE 1.

Alleles affecting transitions between the two catalytic conformations of the spliceosome

Name Allele Source
First-step catalytic conformation prp16-302 R456K and G691R Madhani and Guthrie 1994
prp16-R686l R686l Hotz and Schwer 1998
U6-lower ISL G63c Eysmont et al. 2019
Transition-state suppressors of prp16-302 U6-upper ISL A79g Eysmont et al. 2019
U6-catalytic triplex A59c, C61a Eysmont et al. 2019
U6-upstream of ACAGA ΔA41, A41c, A41g, A42c, A42g, ΔC43, C43g, C43u, ΔA44, A44c, A44u, A45g, U46a, U46g Madhani and Guthrie 1994; this study
cwc2 W37A Hogg et al. 2014
E17D, S38P, Q54L, P55S, Q56H, D98V, K101T, C111R, l127T, N134S, F162l, W225R This study
prp8 N-terminal D278G, F331L, Y356C, T589P, Y590F, Y590C, K603l, K611L, K611l, K611T, K611E, S613T This study
Second-step catalytic conformation U6-lower ISL G63c Eysmont et al. 2019
prp8 second step V1870N, W1575R Liu et al. 2007

This Article

  1. RNA 30: 1199-1212