Robo-Therm, a pipeline to RNA thermometer discovery and validation

TABLE 1.

Genomic description of RNA thermometers discovered by Robo-Therm

Gene Protein description Genome
tetR tetR family transcriptional regulator Escherichia coli
Shigella flexneri
σ70 RNA polymerase subunit σ70 Mediterraneibacter gnavus
Bacteroides pectinophilus
Caudoviricetes (bacteriophage)
blyA Autolysin enzyme (N-acetylmuramoyl-l-alanine amidase) Bacillus subtilis
SPβc2 (bacteriophage)

This Article

  1. Published in Advance April 2, 2024, doi: 10.1261/rna.079980.124 RNA 30: 760-769

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