NMDtxDB: data-driven identification and annotation of human NMD target transcripts

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

FIGURE 9.
FIGURE 9.

NMDtxDB page for OGA, a relevant metabolic enzyme that was recently described as an NMD target. In NMDtxDB, novel transcripts IDs are preceded by MSTRG, and can match to reference transcripts. MSTRG.3950.3 harbors a PTC derived from an OpenProt CDS source. This transcript is also significantly upregulated in three conditions.

This Article

  1. RNA 30: 1277-1291