VfoldMCPX: predicting multistrand RNA complexes

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FIGURE 2.
FIGURE 2.

(A) A schematic diagram for the H-type pseudoknot motif, which is divided into three single-stranded loops (L1, L2 and L3, green and orange) and two helix stems (S1 and S2, blue) that may contain an internal/bulge loop. (B–I) Schematic diagrams for the H-type pseudoknot motif with one or more phantom linkers in different positions. Structures that contain the linkers are labeled. The phantom linkers are depicted as red dots.

This Article

  1. Published in Advance January 20, 2022, doi: 10.1261/rna.079020.121 RNA 28: 596-608

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