Identification of high-confidence human poly(A) RNA isoform scaffolds using nanopore sequencing

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FIGURE 4.
FIGURE 4.

Multiplex RACE. Heatmaps of three promoter marks: PolR2 (ENCFF340BYJ), SPI1 (ENCFF289XSX) ChIP-seq, DNase-seq (ENCFF093VXI), and CAGE (ENCFF580WIH), each showing 2 kb flanking regions at the 5′ end of the 93 candidate isoforms. The upper panel shows the 64 candidate TSS that were validated by RACE, the lower panel corresponds to the 29 TSS not validated by RACE.

This Article

  1. Published in Advance November 2, 2021, doi: 10.1261/rna.078703.121 RNA 28: 162-176

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