De novo prediction of RNA–protein interactions with graph neural networks

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

FIGURE 1.
FIGURE 1.

Pictorial representation of the framework presented in this paper: the raw data is transformed to obtain node features, positive and negative interactions, which serve as input for the GNN. The trained model is used for making predictions as shown using the genome tracks.

This Article

  1. RNA 28: 1469-1480