APOBEC1 mediated C-to-U RNA editing: target sequence and trans-acting factor contribution to 177 RNA editing events in 119 murine transcripts in vivo

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FIGURE 4.
FIGURE 4.

Secondary structure standardized minimum free energy. (A,B) Distribution of the RNA editing sites based on the standardized minimal free Gibbs energy of the editing cassette secondary structure (S-ΔG). (C) Association of S-ΔG with GC content of the editing cassette. (D) Association between S-ΔG and ratio of main stem–loop bases to total bases count. (E) Association of the edited cytosine location with S-ΔG. (F) Association of S-ΔG with editing frequency.

This Article

  1. RNA 27: 876-890