Assessing the accuracy of direct-coupling analysis for RNA contact prediction

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FIGURE 7.
FIGURE 7.

SAM-I/IV riboswitch (PDB code 4L81), least accurate Boltzmann learning prediction (A), and respective pseudolikelihood prediction (B). Correctly predicted contacts in secondary structure are shown in dark gray. Correctly predicted tertiary contacts are shown in light gray. False positives are shown with dashed lines. Prediction with R-scape is shown in C.

This Article

  1. Published in Advance February 27, 2020, doi: 10.1261/rna.074179.119 RNA 26: 637-647

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