Francesca Cuturello; Guido Tiana; Giovanni Bussi

Assessing the accuracy of direct-coupling analysis for RNA contact prediction

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FIGURE 3.

$\text{[math]}$ of Boltzmann learning DCA, pseudolikelihood DCA, mean-field DCA, mutual information, and R-scape for 17 RNA families at the threshold obtained through cross-validation procedure. The recommended threshold 0.05 was used for R-scape. Families are labeled using the PDB code of the representative crystallographic structure. Average $\text{[math]}$ is also reported. Alignments are performed with Infernal.