Molecular mechanism for preQ1-II riboswitch function revealed by molecular dynamics

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FIGURE 2.
FIGURE 2.

PreQ1-II riboswitch binding pocket mass-weighted, heavy-atom RMSD to starting structure as function of time. The left column shows four ligand-bound simulations and the right column shows four apo simulations. The binding pocket is defined as nucleotides C30, U31, U32, U41, and A70.

This Article

  1. Published in Advance September 14, 2015, doi: 10.1261/rna.051367.115 RNA 21: 1898-1907

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