Prevalent RNA recognition motif duplication in the human genome

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FIGURE 6.
FIGURE 6.

Sequence motifs enriched in the RRM-containing RBPs. (A) We removed the RRM sequence from the RBPs and analyzed the remaining sequence for amino acid propensities. For all 20 amino acids, their frequencies within non-RRM regions were compared to other proteins in the human proteome and the relative ratio is plotted. (B) Sequence logos around the most enriched amino acid residues in RBPs. The height of each single-letter amino acid code corresponds to the probability of occurrence at each position. (C) Repetitive sequence patterns that significantly co-occur with RRM in all human proteins. The size of each pattern corresponds to the number of occurrence. The word cloud was generated with the Wordle online tool. The top 80 motifs are shown.

This Article

  1. RNA 20: 702-712