
The chemical structure of 3-methylcytidine and its position in tRNAThr1 and tRNASer1. (A) Chemical structure of 3-methylcytidine (m3C). (B) Secondary structures of S. cerevisiae tRNAThr1 and tRNASer1 with modified nucleosides: 3-methylcytidine (m3C), N2-methylguanosine (m2G), dihydrouridine (D), N2,N2-dimethylguanosine (m22G), inosine (I), N6-threonylcarbamoyladenosine (t6A), pseudouridine (Ψ), 5-methylcytidine (m5C), 5-methyluridine (m5U), 1-methyladenosine (m1A), N4-acetylcytidine (ac4C), 2′-O-methylguanosine (Gm), 5-carbamoylmethyluridine (ncm5U), N6-isopentenyladenosine (i6A), and 2′-O-methyluridine (Um). Arrows indicate sites of RNase T1 cleavage to generate RNA fragments containing residues at position 32.










