Table of Contents

February 2010; 16 (2)

PERSPECTIVE

  • Selections that optimize RNA display in the yeast three-hybrid system

    • Susan E. Wurster and
    • L. James Maher III
    RNA February 2010 16: 253-258; Published in Advance December 14, 2009, doi:10.1261/rna.1880410

REVIEW

  • An unexpected ending: Noncanonical 3′ end processing mechanisms

    • Jeremy E. Wilusz and
    • David L. Spector
    RNA February 2010 16: 259-266; Published in Advance December 9, 2009, doi:10.1261/rna.1907510

LETTERS TO THE EDITOR

  • Profiling non-lysyl tRNAs in HIV-1

    • Mariana Pavon-Eternod,
    • Min Wei,
    • Tao Pan,
    • and Lawrence Kleiman
    RNA February 2010 16: 267-273; Published in Advance December 9, 2009, doi:10.1261/rna.1928110

  • Evidence for bacterial origin of heat shock RNA-1

    • Dong Seon Kim,
    • Younghoon Lee,
    • and Yoonsoo Hahn
    RNA February 2010 16: 274-279; Published in Advance December 29, 2009, doi:10.1261/rna.1879610

BIOINFORMATICS

  • Natural and artificial RNAs occupy the same restricted region of sequence space

    • Ryan Kennedy,
    • Manuel E. Lladser,
    • Zhiyuan Wu,
    • Chen Zhang,
    • Michael Yarus,
    • Hans De Sterck,
    • and Rob Knight
    RNA February 2010 16: 280-289; Published in Advance December 23, 2009, doi:10.1261/rna.1923210
    OPEN ACCESS ARTICLE

  • Computational prediction of Caenorhabditis box H/ACA snoRNAs using genomic properties of their host genes

    • Paul Po-Shen Wang and
    • Ilya Ruvinsky
    RNA February 2010 16: 290-298; Published in Advance December 28, 2009, doi:10.1261/rna.1876210

REPORTS

  • Accommodation of tmRNA–SmpB into stalled ribosomes: A cryo-EM study

    • Felix Weis,
    • Patrick Bron,
    • Jean-Paul Rolland,
    • Daniel Thomas,
    • Brice Felden,
    • and Reynald Gillet
    RNA February 2010 16: 299-306; Published in Advance December 28, 2009, doi:10.1261/rna.1757410

  • Post-transcriptional regulation of miR-27 in murine cytomegalovirus infection

    • Amy H. Buck,
    • Jonathan Perot,
    • Michael A. Chisholm,
    • Diwakar S. Kumar,
    • Lee Tuddenham,
    • Valérie Cognat,
    • Lisa Marcinowski,
    • Lars Dölken,
    • and Sébastien Pfeffer
    RNA February 2010 16: 307-315; Published in Advance January 4, 2010, doi:10.1261/rna.1819210
    OPEN ACCESS ARTICLE

  • Bacterial Hen1 is a 3′ terminal RNA ribose 2′-O-methyltransferase component of a bacterial RNA repair cassette

    • Ruchi Jain and
    • Stewart Shuman
    RNA February 2010 16: 316-323; Published in Advance December 9, 2009, doi:10.1261/rna.1926510

ARTICLES

  • Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells

    • Jameelah Sheik Mohamed,
    • Philip Michael Gaughwin,
    • Bing Lim,
    • Paul Robson,
    • and Leonard Lipovich
    RNA February 2010 16: 324-337; Published in Advance December 21, 2009, doi:10.1261/rna.1441510

  • The nuclear experience of CPEB: Implications for RNA processing and translational control

    • Chien-Ling Lin,
    • Veronica Evans,
    • Shihao Shen,
    • Yi Xing,
    • and Joel D. Richter
    RNA February 2010 16: 338-348; Published in Advance December 29, 2009, doi:10.1261/rna.1779810

  • Neuron-type specific regulation of a 3′UTR through redundant and combinatorially acting cis-regulatory elements

    • Dominic Didiano,
    • Luisa Cochella,
    • Baris Tursun,
    • and Oliver Hobert
    RNA February 2010 16: 349-363; Published in Advance December 29, 2009, doi:10.1261/rna.1931510

  • Preferential translation of Hsp83 in Leishmania requires a thermosensitive polypyrimidine-rich element in the 3′ UTR and involves scanning of the 5′ UTR

    • Maya David,
    • Idan Gabdank,
    • Miriam Ben-David,
    • Alon Zilka,
    • Irit Orr,
    • Danny Barash,
    • and Michal Shapira
    RNA February 2010 16: 364-374; Published in Advance December 29, 2009, doi:10.1261/rna.1874710

  • The adenosine wedge: A new structural motif in ribosomal RNA

    • Matthieu G. Gagnon and
    • Sergey V. Steinberg
    RNA February 2010 16: 375-381; Published in Advance December 28, 2009, doi:10.1261/rna.1550310

  • Enzymatic and nonenzymatic functions of viral RNA-dependent RNA polymerases within oligomeric arrays

    • Jeannie F. Spagnolo,
    • Evan Rossignol,
    • Esther Bullitt,
    • and Karla Kirkegaard
    RNA February 2010 16: 382-393; Published in Advance January 5, 2010, doi:10.1261/rna.1955410
    OPEN ACCESS ARTICLE

  • Anti-Argonaute RIP-Chip shows that miRNA transfections alter global patterns of mRNA recruitment to microribonucleoprotein complexes

    • Wang-Xia Wang,
    • Bernard R. Wilfred,
    • Yanling Hu,
    • Arnold J. Stromberg,
    • and Peter T. Nelson
    RNA February 2010 16: 394-404; Published in Advance December 30, 2009, doi:10.1261/rna.1905910

  • Autoregulation of Fox protein expression to produce dominant negative splicing factors

    • Andrey Damianov and
    • Douglas L. Black
    RNA February 2010 16: 405-416; Published in Advance December 30, 2009, doi:10.1261/rna.1838210
    OPEN ACCESS ARTICLE

  • Thermodynamic characterization of naturally occurring RNA tetraloops

    • Justin P. Sheehy,
    • Amber R. Davis,
    • and Brent M. Znosko
    RNA February 2010 16: 417-429; Published in Advance January 4, 2010, doi:10.1261/rna.1773110

  • Intended transcriptional silencing with siRNA results in gene repression through sequence-specific off-targeting

    • Joshua Moses,
    • Amber Goodchild,
    • and Laurent P. Rivory
    RNA February 2010 16: 430-441; Published in Advance December 21, 2009, doi:10.1261/rna.1808510

METHODS

  • High-throughput quantification of splicing isoforms

    • Jean-Philippe Brosseau,
    • Jean-François Lucier,
    • Elvy Lapointe,
    • Mathieu Durand,
    • Daniel Gendron,
    • Julien Gervais-Bird,
    • Karine Tremblay,
    • Jean-Pierre Perreault,
    • and Sherif Abou Elela
    RNA February 2010 16: 442-449; Published in Advance December 28, 2009, doi:10.1261/rna.1877010
    OPEN ACCESS ARTICLE

  • Application of housekeeping npcRNAs for quantitative expression analysis of human transcriptome by real-time PCR

    • Chenna R. Galiveti,
    • Timofey S. Rozhdestvensky,
    • Jürgen Brosius,
    • Hans Lehrach,
    • and Zoltán Konthur
    RNA February 2010 16: 450-461; Published in Advance December 29, 2009, doi:10.1261/rna.1755810
    OPEN ACCESS ARTICLE
|

This Issue

February 2010; 16 (2)
Cover
  1. PERSPECTIVE
  2. REVIEW
  3. LETTERS TO THE EDITOR
  4. BIOINFORMATICS
  5. REPORTS
  6. ARTICLES
  7. METHODS

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