Coplanar and coaxial orientations of RNA bases and helices

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FIGURE 3.
FIGURE 3.

Plot in barycentric coordinates for all known RNA structures as defined by Equation (2). Each dot represents a single, known RNA structure. The position of the dot indicates the bipolar (bottom left), coplanar (bottom right), or random (top) nature of the distribution of base-normal vectors in the RNA molecule. The cyan star indicates the corresponding barycentric coordinates of the P4–P6 subdomain of the L-21 T. thermophila group I intron crystal structure. Red, green, cyan, and blue dots are tRNAs, rRNAs, catalytic RNAs, and uncategorized RNAs, respectively.

This Article

  1. RNA 13: 643-650