AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II

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FIGURE 2.
FIGURE 2.

Sequence alignment of AtCyp59 RRM with corresponding domains from different organisms. Sequences were aligned by using ClustalW and shaded on BoxShade server. Amino acids identical or similar in 50% of sequences are shaded on black or on gray background, respectively. Order of the sequences is as appeared in ClustalW output. The RNP1 and RNP2 motifs of RRM are overlined. Hs, Homo sapiens; Mm, Mus musculus; Rn, Rattus norvegicus; Ci, Cionia intestinalis; Dr, Danio rerio; Gg, Gallus gallus; Tn, Tetraodon nigrovirides; Ce, Caenorhabditis elegans; Dm, Drosophila melanogaster; Ag, Aenopheles gambiae; At, Arabidopsis thaliana; Os, Oryza sativa; Ch, Cryptosporidium hominis; Cp, Cryptosporidium parvum; Pf, Plasmodium falciparum; Pyy, Plasmodium yoelii yoelii; Dd, Dictyostelium discoideum; Eh, Entamoeba histolytica; Pt, Paramecium tetraurelia; Sp, SchizoSaccharomyces pombe; Nc, Neurospora crassa; Mg, Magnaportae grisea; Gz, Gibberella zeae; An, Aspergillus nidulans; Cpo, Coccidioides posadasii; Cim, Coccidioides immitis; Eg, Eremothecium gossypii; Dh, Debaryomyces hansenii; Kw, Kluyveromyces waltii; Sk, Saccharomyces kluyveri; Yl, Yarrowia lipolytica; Cc, Cryptococcus cinereea okayama; Cn, Cryptococcus neoformans; Pc, Phanerochaete chrysosporium; Um, Ustilago maydis; Pa, Pichia angusta.

This Article

  1. RNA 12: 631-643